Recently, there has been great success in applying deep neural networks on graph structured data. Most work, however, focuses on either node- or graph-level supervised learning, such as node, link or graph classification or node-level unsupervised learning (e.g., node clustering). Despite its wide range of possible applications, graph-level unsupervised representation learning has not received much attention yet. This might be mainly attributed to the high representation complexity of graphs, which can be represented by n! equivalent adjacency matrices, where n is the number of nodes. In this work we address this issue by proposing a permutation-invariant variational autoencoder for graph structured data. Our proposed model indirectly learns to match the node order of input and output graph, without imposing a particular node order or performing expensive graph matching.
| Authors | Winter, R.; Noutahi, E.; Kirchmeyer, M.; Gagné, C. |
|---|---|
| Year | 2021 |
| Venue | NeurIPS 34, pp. 9559–9573 |
| DOI | 10.48550/arxiv.2104.09856 (auto-fetched · OpenAlex) |
| Source Database | Backtracking |
| Bridge-to-GNN | Category E |
| GNN Architecture | MPNN (heuristic — verify) |
| Graph Encoding | Not yet extracted from PDF |
| AEC Task | Not yet extracted from PDF |
| Cohort | Early Infrastructure (2020–2021) |
| Dataset Size | 25000 graphs; 20 nodes (heuristic — verify) |
|---|---|
| Primary Metric | Accuracy (heuristic — verify) |
| Primary Value | 99.93% (heuristic — verify) |
| Key Finding | to solve the reordering problem in Eq (heuristic — verify) |
| Quality Assessment | 3/6 · rigor: Medium · Code/Data: ✓Benchmark: ✓Baseline: ✓ (heuristic — verify) |
| GNN architectures detected | MPNN · Graph GAN · Graph VAE / VGAE · Node2Vec / DeepWalk |
|---|---|
| Benchmark datasets referenced | QM9 · MoleculeNet |
| Code repositories found in text | https://github.com/jrwnter/pigvae |
| Dataset stats found | 20 nodes · 25000 graphs · 28 nodes · 128 nodes |
| Reported metrics + values | Accuracy: 99.93% |
| Quality (heuristic, 6-flag) | 3/6 · rigor: Medium Code/Data: ✓Benchmark: ✓Baseline: ✓CV/Split: —Ablation: —Reproducible: — |
Part of the GML/GNN in AEC Systematic Review (PRISMA 2020) — 112 papers, 2020–2026